WARNING: the argument --multi-file is deprecated. This is not fatal, as GenProg can handle certain deprecated options as of the March 2012 refactor.
However, you may want to consult the GenProg documentation to avoid using 
deprecated options in the future, and verify that your config is doing what you
think it is doing.WARNING: the argument --suffix-extension is deprecated. This is not fatal, as GenProg can handle certain deprecated options as of the March 2012 refactor.
However, you may want to consult the GenProg documentation to avoid using 
deprecated options in the future, and verify that your config is doing what you
think it is doing.--allow-coverage-fail false
--appp 0.5
--asm-code-only false
--best-edit-rule "1 * fault_loc_weight ; 1 * max_test_fail_prob ; -1 * num_tests"
--best-test-rule "1 * test_fail_prob ; 1 * test_fail_count ; -1 * test_pass_count"
--compiler "gcc"
--compiler-command "perl compile.pl __EXE_NAME__ > /dev/null"
--compiler-opts ""
--continue false
--coverage-info ""
--coverage-per-test false
--crossover "one"
--crossp 0.5
--delp 0.85
--describe-machine true
--diversity-selection 0
--edit-script false
--elf-risc false
--exclude-edits ""
--exp-diff false
--fault-file ""
--fault-path "coverage.path.neg"
--fault-scheme "path"
--fitness-in-parallel 1
--fix-file ""
--fix-oracle ""
--fix-path "coverage.path.pos"
--fix-scheme "default"
--flatten-path ""
--format "txt"
--gen-per-exchange 1
--generations 10
--gui false
--hostname "127.0.0.1"
--ignore-dead-code false
--ignore-equiv-appends false
--ignore-standard-headers false
--ignore-string-equiv-fixes false
--ignore-untyped-returns false
--incoming-pop ""
--keep-source false
--label-repair false
--max-evals 0
--minimization false
--mt-cov false
--multiopt-minimize false
--multiopt-no-inf false
--neg-tests 1
--neg-weight 0.35
--negative-test-weight 2
--neutral-walk-max-size 0
--neutral-walk-weight ""
--nht-id "global"
--nht-port 51000
--nht-server ""
--no-rep-cache false
--no-test-cache false
--num-comps 2
--num-objectives 2
--oracle-genome ""
--popsize 40
--port 60000
--pos-tests 34
--pos-weight 0.65
--prefix "preprocessed"
--preprocessor ""
--print-incremental-evals false
--print-source-name false
--program "bugged-program.txt"
--promut 1
--quiet false
--regen-paths false
--rep "cilpatch"
--rep-cache "default.cache"
--repp 0.75
--samp-strat "variant"
--sample 0.1
--sample-runs 100
--sanity "yes"
--search "ga"
--seed 9
--semantic-check "scope"
--single-fitness false
--skip-failed-sanity-tests false
--skip-tests ""
--split-search 0
--sport 65000
--subatom-constp 0.5
--subatom-mutp 0
--super-mutant false
--super-mutant-size 50
--swap-bug false
--swapp 0
--template-cache ""
--templates ""
--test-command "__TEST_SCRIPT__ __TEST_NAME__ __EXE_NAME__ >& /dev/null"
--test-script "./test.sh"
--tournament-size 2
--tweet false
--uniq false
--valgrind false
--variants-exchanged 50
uname -a: Linux ip-10-166-52-54 2.6.34.7-61.fc13.i686.PAE #1 SMP Tue Oct 19 04:24:06 UTC 2010 i686 i686 i386 GNU/Linux
date: Sat Sep 21 15:30:00 EDT 2013
id: uid=0(root) gid=0(root) groups=0(root),1(bin),2(daemon),3(sys),4(adm),6(disk),10(wheel) context=system_u:system_r:kernel_t:s0
cat /etc/redhat-release: Fedora release 13 (Goddard)
grep 'model name' /proc/cpuinfo: model name	: Intel(R) Xeon(R) CPU E5-2650 0 @ 2.00GHz
grep 'MemTotal' /proc/meminfo: MemTotal:        1747596 kB
grep 'SwapTotal' /proc/meminfo: SwapTotal:             0 kB
cilRep: preprocessing IO function signatures: /tmp/tmpa64858.c /tmp/tmpb4a433.c
cilRep: done preprocessing IO function signatures
Exception in loading: Sys_error("default.cache: No such file or directory")
cilrep: from_source: pre: stmt_count = 1
cilRep: preprocessed/libtiff/tif_aux.c: parsing
cilRep: preprocessed/libtiff/tif_aux.c: parsed (0.140211 MB)
cilRep: preprocessed/libtiff/tif_dir.c: parsing
cilRep: preprocessed/libtiff/tif_dir.c: parsed (0.139377 MB)
cilRep: preprocessed/libtiff/tif_dirinfo.c: parsing
cilRep: preprocessed/libtiff/tif_dirinfo.c: parsed (0.166938 MB)
cilRep: preprocessed/libtiff/tif_dirread.c: parsing
cilRep: preprocessed/libtiff/tif_dirread.c: parsed (0.167183 MB)
cilRep: preprocessed/libtiff/tif_dirwrite.c: parsing
cilRep: preprocessed/libtiff/tif_dirwrite.c: parsed (0.137187 MB)
cilRep: preprocessed/libtiff/tif_getimage.c: parsing
cilRep: preprocessed/libtiff/tif_getimage.c: parsed (0.289599 MB)
cilRep: preprocessed/libtiff/tif_jpeg.c: parsing
cilRep: preprocessed/libtiff/tif_jpeg.c: parsed (0.0838633 MB)
cilRep: preprocessed/libtiff/tif_print.c: parsing
cilRep: preprocessed/libtiff/tif_print.c: parsed (0.113779 MB)
cilrep: from_source: post: stmt_count: 8370
cachingRepresentation: sanity checking begins
	/root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_print.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_jpeg.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_getimage.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_dirwrite.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_dirread.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_dirinfo.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_dir.c /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/libtiff/tif_aux.c  original fails to compile
cachingRepresentation: /root/mountpoint-genprog/genprog-many-bugs/libtiff-bug-2005-12-27-6f76e76-5dac30f/sanity/repair.sanity.c: does not compile

ABORT:

cachingRepresentation: sanity check failed (compilation)
Rep: saving test cache

Variant Test Case Queries: 0
"Test Suite Evaluations": 0

Compile Failures: 1
Wall-Clock Seconds Elapsed: 2.58718
  Activity Name                     Count Seconds = Percent of Total Time
  compile                               1   0.501 = 100%
  TOTAL                                     0.501 = 19.3088% (avg CPU usage)
libtiff-bug-2005-12-27-6f76e76-5dac30f.tar.gz
Sat Sep 21 15:30:07 EDT 2013
shutting down
